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Area of ENGAGEMENTS

Bioinformatics

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    Bioinformatics Brief Internship Module

  • 01

    Introduction to Bioinformatics
  • 02

    Sequence data visualization

    Chromatogram explorer, FinchTV, AliView

  • 03

    Sequence data trimming

    Chromatogram explorer, FinchTV, AliView

  • 04

    Biological Databases

    GenBank, PDB, Uniprot

  • 05

    Database mining

    NCBI PubMed, Literatures

  • 06

    Local database creation

    Excel

  • 07

    Database similarity search and BLAST search

    NCBI BLAST

  • 08

    Multiple Sequence Alignment (MSA)

    AliView

  • 09

    Renaming sequence titles

    Excel, BioEdit

  • 10

    Introduction to Phylogenetics

    Fast Tree

  • 11

    Distance based tree construction (Neighbor joining and UPGMA)

    MEGA, FigTree

  • 12

    IQ tree construction

    IQ Tree, FigTree

INTERNSHIP & TRAINING FORM